Browndye 2.0

Brownian Dynamics of Biological Molecules


Please note that a compiler that can compile the C++17 version of C++ is now required.

Last updated: 20 Oct 2023

Brought To You By: The McCammon Research Group

Main Author: Gary A. Huber

Documentation

Documentation for bd_top

Documentation for make_apbs_inputs and run_apbs_inputs

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Fixes and Updates

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If you have any problems, suggestions, or ideas, send email to Gary Huber or to the mailing list.

This adds the capability of more than two rigid bodies as well as flexible chains. It should be considered a beta release since there may still be "surprises" lurking.